Hi, Racesol
Sorry I missed the last line of your post, Dont now if, Bob Campbell's combo break out board is change-able thaogh.
Give this a shot, Under port's and pin's change your Dir Low Active and Step Low Active to the other State,
Some controls are sensitive to leading - trailing Edge pulses setting's.
If this changes your Motor Direction, you can change there Direction in Conf, Motor Home and limit's, Reversed, change state there .
I've run in to this several Time's
Make sure if in CV mode and Backlash isn't turned on at the same time also.
Left this for other's, may help someone.
If you haven't changed any cables and it's a software issue ,
Try changing your Step / Dir Pulses, there used to give your servo control more time to see the Mach output pulse.
It's under Config, Motor Tuning, Step Pulse and Dir Pulse set them to 5, then test.
If this is it then back the setting down to the point it's jerky again, then backup one, range 0-5.
Hope this Helps, Chip