I'm not using a C6, but a C11, and I have the same problem. Often, first thing in the morning, the speed control is completely whacked, and commanding a very slow speed will result in a very high speed, or a wildly fluctuating speed. After being powered for 10-15 minutes, it finally settles down and starts behaving. It seems completely unpredictable, as some days it works fine, other days it doesn't. I had one day that I couldn't get it to behave at all. I gave up, and went back into the house for the day. Came out the next morning, and it was working fine. In every case where I've looked, the supply voltage from the VFD was fine, and the pulsetrain from the SmoothStepper was fine, but the output from the C11 was just whacked.
Regards,
Ray L.