Well i have the G540 and like many others, I was having problems losing steps in the Z axis. I've read that using sherline mode fixes this, which it did. Now from my understanding all sherline mode does is increase the pulse width to 40micro.
Anyway, as for the rough radius, I think it was just the material i was cutting (cast tool and jig plate) because i ran some normal 6061 Aluminum last night and the radi's look fine. Its a mystery